SubtiBank SubtiBank
yddI [2019-06-07 09:00:37]
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yddI [2019-06-07 09:00:37]

unknown
Locus
BSU04980
Isoelectric point
5.94
Molecular weight
18.86 kDa
Protein length
168 aa Sequence Blast
Gene length
507 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Prophages and mobile genetic elements → Mobile genetic elements → ICEBs1
  • Groups of genes → Membrane proteins
  • Groups of genes → Proteins of unknown function

    • Gene

    Coordinates
    545,026 545,532

    The protein

    Localization

  • membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    Genes
    xis-ydzL-ydcO-ydcP-ydcQ-nicK-S172-ydcS-ydcT-yddA-conB-conC-conD-conE-yddF-conG-cwlT-yddI-yddJ
    Description
    PubMed

    Regulatory mechanism

  • ImmR: repression, PubMed, in ImmR regulon

    • Regulation

  • strongly induced in the presence of salt (1.2 M NaCl) PubMed
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    Biological materials

    Mutant

  • BKE04980 (yddI::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATTTTCACTCCTAGTTA, downstream forward: _UP4_TAAAAGGTGGAAAAGATCAA
  • BKK04980 (yddI::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATATTTTCACTCCTAGTTA, downstream forward: _UP4_TAAAAGGTGGAAAAGATCAA